Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KMO76043.1 | KMO76044.1 | MOBUDSM44075_02573 | MOBUDSM44075_02574 | Hypothetical protein. | Hypothetical protein. | 0.953 |
KMO76043.1 | cysG | MOBUDSM44075_02573 | MOBUDSM44075_05493 | Hypothetical protein. | Siroheme synthase. | 0.512 |
KMO76043.1 | hemA | MOBUDSM44075_02573 | MOBUDSM44075_02580 | Hypothetical protein. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.859 |
KMO76043.1 | hemB | MOBUDSM44075_02573 | MOBUDSM44075_02577 | Hypothetical protein. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.972 |
KMO76043.1 | hemC | MOBUDSM44075_02573 | MOBUDSM44075_02579 | Hypothetical protein. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.872 |
KMO76043.1 | nasF | MOBUDSM44075_02573 | MOBUDSM44075_02578 | Hypothetical protein. | Uroporphyrinogen-III C-methyltransferase. | 0.969 |
KMO76044.1 | KMO76043.1 | MOBUDSM44075_02574 | MOBUDSM44075_02573 | Hypothetical protein. | Hypothetical protein. | 0.953 |
KMO76044.1 | cysG | MOBUDSM44075_02574 | MOBUDSM44075_05493 | Hypothetical protein. | Siroheme synthase. | 0.514 |
KMO76044.1 | hemA | MOBUDSM44075_02574 | MOBUDSM44075_02580 | Hypothetical protein. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.865 |
KMO76044.1 | hemB | MOBUDSM44075_02574 | MOBUDSM44075_02577 | Hypothetical protein. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.876 |
KMO76044.1 | hemC | MOBUDSM44075_02574 | MOBUDSM44075_02579 | Hypothetical protein. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.939 |
KMO76044.1 | nasF | MOBUDSM44075_02574 | MOBUDSM44075_02578 | Hypothetical protein. | Uroporphyrinogen-III C-methyltransferase. | 0.969 |
KMO82010.1 | cobI | MOBUDSM44075_00133 | MOBUDSM44075_01536 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Precorrin-2 C(20)-methyltransferase; Belongs to the precorrin methyltransferase family. | 0.818 |
KMO82010.1 | cysG | MOBUDSM44075_00133 | MOBUDSM44075_05493 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Siroheme synthase. | 0.984 |
KMO82010.1 | hemA | MOBUDSM44075_00133 | MOBUDSM44075_02580 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.495 |
KMO82010.1 | hemB | MOBUDSM44075_00133 | MOBUDSM44075_02577 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. | 0.856 |
KMO82010.1 | hemC | MOBUDSM44075_00133 | MOBUDSM44075_02579 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.986 |
KMO82010.1 | hemE | MOBUDSM44075_00133 | MOBUDSM44075_02181 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.937 |
KMO82010.1 | nasF | MOBUDSM44075_00133 | MOBUDSM44075_02578 | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | Uroporphyrinogen-III C-methyltransferase. | 0.947 |
cobI | KMO82010.1 | MOBUDSM44075_01536 | MOBUDSM44075_00133 | Precorrin-2 C(20)-methyltransferase; Belongs to the precorrin methyltransferase family. | Bifunctional uroporphyrinogen-III synthetase/response regulator domain protein. | 0.818 |
page 1 of 4