STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spoIIIEDNA translocase SpoIIIE. (806 aa)    
Predicted Functional Partners:
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
   
 
 0.935
ftsZ
Cell division protein FtsZ.
  
 
 0.864
KMO68991.1
Proteins of 100 residues with WXG; Belongs to the WXG100 family.
   
 
 0.852
KMO68992.1
Proteins of 100 residues with WXG; Belongs to the WXG100 family.
   
 
 0.852
esxB
ESAT-6-like protein EsxB.
   
 
 0.849
pbpB
Penicillin-binding protein PbpB.
  
 
 
 0.839
parB
Putative chromosome-partitioning protein ParB; Belongs to the ParB family.
  
   
 0.839
ftsW_1
Lipid II flippase FtsW; Belongs to the SEDS family.
 
  
 0.812
eccD1_1
ESX-1 secretion system protein eccD1.
    
 
 0.804
ssb_2
Single-stranded DNA-binding protein.
 
  
 0.756
Your Current Organism:
Mycolicibacterium obuense
NCBI taxonomy Id: 1807
Other names: ATCC 27023, CCUG 37669, CIP 106803, DSM 44075, HAMBI 2272, JCM 6372, M. obuense, Mycobacterium obuense, NCTC 10778, strain 4388, strain 47001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.