STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acdA_9Acyl-CoA dehydrogenase. (385 aa)    
Predicted Functional Partners:
citE_2
Citrate lyase subunit beta-like protein; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.992
paaZ_2
Bifunctional protein PaaZ.
 
  
 0.989
KMO75489.1
Methylmalonyl-CoA carboxyltransferase 12S subunit.
  
 
 0.986
accA1_2
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
  
 
 0.963
fadJ
Fatty acid oxidation complex subunit alpha.
  
 0.958
etfA
Electron transfer flavoprotein subunit alpha.
   0.940
etfB
Electron transfer flavoprotein subunit beta.
 
   0.933
caiD_1
Carnitinyl-CoA dehydratase.
   
 0.920
caiD_2
Carnitinyl-CoA dehydratase.
   
 0.920
echA8_4
Putative enoyl-CoA hydratase echA8.
   
 0.920
Your Current Organism:
Mycolicibacterium obuense
NCBI taxonomy Id: 1807
Other names: ATCC 27023, CCUG 37669, CIP 106803, DSM 44075, HAMBI 2272, JCM 6372, M. obuense, Mycobacterium obuense, NCTC 10778, strain 4388, strain 47001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.