STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alkB_2Alkane 1-monooxygenase. (392 aa)    
Predicted Functional Partners:
adh_2
Alcohol dehydrogenase.
     
 0.902
alkB_1
Alkane 1-monooxygenase.
  
  
 
0.894
adhT_2
Alcohol dehydrogenase.
     
 0.876
cypE
Putative bifunctional P-450/NADPH-P450 reductase 2.
    
 0.734
KMO68881.1
Stearoyl-CoA 9-desaturase electron transfer partner.
 
 
 0.672
KMO80544.1
Stearoyl-CoA 9-desaturase electron transfer partner.
 
 
 0.668
KMO80403.1
Stearoyl-CoA 9-desaturase electron transfer partner.
 
 
 0.656
hmp_1
3-ketosteroid-9-alpha-hydroxylase reductase subunit.
 
 
 0.600
adhT_1
Alcohol dehydrogenase.
     
 0.599
hmp_2
Flavohemoprotein.
  
 
 0.567
Your Current Organism:
Mycolicibacterium obuense
NCBI taxonomy Id: 1807
Other names: ATCC 27023, CCUG 37669, CIP 106803, DSM 44075, HAMBI 2272, JCM 6372, M. obuense, Mycobacterium obuense, NCTC 10778, strain 4388, strain 47001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.