STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KMO71925.1Eco57I restriction-modification methylase. (536 aa)    
Predicted Functional Partners:
KMO71926.1
Hypothetical protein.
   
 0.992
KMO71924.1
Hypothetical protein.
 
   
 0.967
KMO71923.1
Hypothetical protein.
       0.595
xerC_8
Tyrosine recombinase XerC.
       0.586
xerD_4
Tyrosine recombinase XerD.
       0.586
KMO69109.1
PaaX-like protein C-terminal domain.
   
    0.540
cobB_1
NAD-dependent protein deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class II subfamily.
   
    0.531
cobB_2
NAD-dependent protein deacylase; Belongs to the sirtuin family. Class III subfamily.
   
    0.531
KMO69268.1
Hypothetical protein; Belongs to the UPF0301 (AlgH) family.
   
    0.527
embR_2
Transcriptional regulatory protein EmbR.
   
    0.523
Your Current Organism:
Mycolicibacterium obuense
NCBI taxonomy Id: 1807
Other names: ATCC 27023, CCUG 37669, CIP 106803, DSM 44075, HAMBI 2272, JCM 6372, M. obuense, Mycobacterium obuense, NCTC 10778, strain 4388, strain 47001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.