STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyaA_2Adenylate cyclase 1. (507 aa)    
Predicted Functional Partners:
KMO80454.1
GAF domain protein.
  
 0.999
arcB_1
Aerobic respiration control sensor protein ArcB.
 
 0.998
dosT_1
Hypoxia sensor histidine kinase response regulator DosT.
 
 0.998
rpfC
Sensory/regulatory protein RpfC.
 0.997
todS
Sensor histidine kinase TodS.
  
 0.997
yfgF
Cyclic di-GMP phosphodiesterase YfgF.
 
 0.992
cya_2
Adenylate cyclase; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
 
0.992
KMO68941.1
Hypothetical protein.
  
 0.992
gmr_1
Cyclic di-GMP phosphodiesterase Gmr.
 
 0.985
dosC_2
Diguanylate cyclase DosC.
 
 0.985
Your Current Organism:
Mycolicibacterium obuense
NCBI taxonomy Id: 1807
Other names: ATCC 27023, CCUG 37669, CIP 106803, DSM 44075, HAMBI 2272, JCM 6372, M. obuense, Mycobacterium obuense, NCTC 10778, strain 4388, strain 47001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.