STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ethR_5HTH-type transcriptional regulator EthR. (211 aa)    
Predicted Functional Partners:
sadH_4
Putative oxidoreductase SadH; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.850
KMO68257.1
Putative cytochrome P450 120.
       0.570
erp
Exported repetitive protein precursor.
  
     0.567
KMO72300.1
Hypothetical protein.
  
     0.566
KMO81676.1
Immunogenic protein MPT63 precursor.
  
     0.545
KMO81786.1
Hypothetical protein.
  
     0.534
KMO79972.1
GDSL-like Lipase/Acylhydrolase.
  
     0.517
KMO79919.1
Hypothetical protein.
  
     0.489
KMO69271.1
Hypothetical protein.
  
     0.487
KMO75938.1
Hypothetical protein.
  
     0.483
Your Current Organism:
Mycolicibacterium obuense
NCBI taxonomy Id: 1807
Other names: ATCC 27023, CCUG 37669, CIP 106803, DSM 44075, HAMBI 2272, JCM 6372, M. obuense, Mycobacterium obuense, NCTC 10778, strain 4388, strain 47001
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.