STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fabG_363-oxoacyl-[acyl-carrier-protein] reductase FabG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (239 aa)    
Predicted Functional Partners:
KMO75508.1
Actinorhodin polyketide putative beta-ketoacyl synthase 1.
  
 
 0.844
lgrD_1
Linear gramicidin synthase subunit D.
  
 
 0.825
eryA
Erythronolide synthase, modules 1 and 2.
   
 0.678
KMO76106.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
   
 0.678
ppsC
Phthiocerol synthesis polyketide synthase type I PpsC.
  
 0.665
ppsA_3
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA.
  
 0.665
ppsA_7
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA.
  
 0.665
KMO76107.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
   
 0.664
KMO74803.1
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.638
fabG_31
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
 
   0.618
Your Current Organism:
Mycolicibacterium obuense
NCBI taxonomy Id: 1807
Other names: ATCC 27023, CCUG 37669, CIP 106803, DSM 44075, HAMBI 2272, JCM 6372, M. obuense, Mycobacterium obuense, NCTC 10778, strain 4388, strain 47001
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