STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001689445_00082Unannotated protein. (1038 aa)    
Predicted Functional Partners:
GCA_001689445_00083
Unannotated protein.
 
     0.930
GCA_001689445_00119
Unannotated protein.
 
     0.769
GCA_001689445_00900
Unannotated protein.
 
  
 0.769
GCA_001689445_01990
Unannotated protein.
 
  
 0.757
GCA_001689445_01262
Unannotated protein.
  
     0.744
GCA_001689445_00496
Unannotated protein.
  
  0.721
GCA_001689445_00539
Unannotated protein.
  
  0.720
GCA_001689445_00298
Unannotated protein.
  
  0.719
GCA_001689445_00161
Unannotated protein.
  
     0.702
GCA_001689445_00434
Unannotated protein.
  
     0.697
Your Current Organism:
Bacteroidales bacterium M3
NCBI taxonomy Id: 1807731
Other names: B. bacterium M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.