STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001689445_00456Unannotated protein. (311 aa)    
Predicted Functional Partners:
GCA_001689445_00454
Unannotated protein.
  
    0.778
GCA_001689445_00455
Unannotated protein.
       0.778
GCA_001689445_00453
Unannotated protein.
       0.773
GCA_001689445_00452
Unannotated protein.
 
  
 0.733
GCA_001689445_01981
Unannotated protein.
 
0.613
GCA_001689445_01108
Unannotated protein.
  
 
  0.528
GCA_001689445_01982
Unannotated protein.
 
    0.457
GCA_001689445_00381
Unannotated protein.
  
 
 0.453
GCA_001689445_01452
Unannotated protein.
  
 
 0.453
GCA_001689445_00457
Unannotated protein.
       0.406
Your Current Organism:
Bacteroidales bacterium M3
NCBI taxonomy Id: 1807731
Other names: B. bacterium M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.