STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001701105_01623Unannotated protein. (828 aa)    
Predicted Functional Partners:
GCA_001701105_01621
Unannotated protein.
       0.803
GCA_001701105_01622
Unannotated protein.
       0.773
GCA_001701105_01080
Unannotated protein.
  
     0.761
GCA_001701105_00967
Unannotated protein.
  
     0.757
GCA_001701105_01744
Unannotated protein.
  
     0.717
GCA_001701105_00966
Unannotated protein.
  
     0.712
GCA_001701105_01424
Unannotated protein.
 
     0.679
GCA_001701105_00797
Unannotated protein.
  
     0.645
GCA_001701105_00636
Unannotated protein.
  
     0.629
GCA_001701105_00665
Unannotated protein.
  
     0.619
Your Current Organism:
Bacteroidales bacterium GP1
NCBI taxonomy Id: 1807745
Other names: B. bacterium GP1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.