STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001562055_00322Unannotated protein. (294 aa)    
Predicted Functional Partners:
GCA_001562055_00321
Unannotated protein.
       0.746
GCA_001562055_02012
Unannotated protein.
  
 
 0.739
GCA_001562055_01921
Unannotated protein.
  
  
 
0.738
GCA_001562055_00479
Unannotated protein.
  
 
  0.692
GCA_001562055_00564
Unannotated protein.
  
 
  0.692
GCA_001562055_03294
Unannotated protein.
  
 
 0.684
GCA_001562055_02336
Unannotated protein.
  
 
 0.676
GCA_001562055_00737
Unannotated protein.
  
 
 0.670
GCA_001562055_01864
Unannotated protein.
    
  0.648
GCA_001562055_02340
Unannotated protein.
  
 
 0.624
Your Current Organism:
Pseudovibrio stylochi
NCBI taxonomy Id: 1807766
Other names: KCTC 42384, MCCC 1K00452, P. stylochi, Pseudovibrio sp. UST20140214-052, Pseudovibrio stylochi Zhang et al. 2016, strain UST20140214-052
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.