Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
ARA75071.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (820 aa)    
Predicted Functional Partners:
ARA75072.1
Glycoside hydrolase 105 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.907
ARA75073.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.
       0.787
ARA75074.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.771
ARA75075.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.767
ARA75070.1
Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.742
ARA75076.1
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.719
ARA76766.1
DNA translocase FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.563
ARA78572.1
Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.505
ARA74540.1
TonB-dependent vitamin B12 receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
   0.501
ARA74529.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
Your Current Organism:
Pectobacterium brasiliense
NCBI taxonomy Id: 180957
Other names: CFBP 6617, Erwinia carotovora subsp. brasiliensis, LMG 21371, LMG:21371, NCPPB 4609, P. brasiliense, Pectobacterium brasiliense Portier et al. 2019, Pectobacterium brasiliensis, Pectobacterium carotovorum subsp. brasiliense, Pectobacterium carotovorum subsp. brasiliensis, strain 212
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