Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARA75822.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (684 aa)    
Predicted Functional Partners:
ARA75343.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.624
ARA75342.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.581
ARA76257.1
Peptide chain release factor RF-3; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.561
ARA75823.1
Aminotransferase class IV; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.523
ARA75824.1
ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.484
ARA75825.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.452
ARA75826.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.452
ARA78494.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.448
nfi
Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.
  
    0.428
ARA77777.1
DsbA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
Your Current Organism:
Pectobacterium brasiliense
NCBI taxonomy Id: 180957
Other names: CFBP 6617, Erwinia carotovora subsp. brasiliensis, LMG 21371, LMG:21371, NCPPB 4609, P. brasiliense, Pectobacterium brasiliense Portier et al. 2019, Pectobacterium brasiliensis, Pectobacterium carotovorum subsp. brasiliense, Pectobacterium carotovorum subsp. brasiliensis, strain 212
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.