Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ARA76043.1Heme lysase NrfEFG subunit NrfG; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)    
Predicted Functional Partners:
ARA76042.1
Heme lyase NrfEFG subunit NrfF; Possible subunit of a heme lyase.
 
 0.982
ARA76041.1
Heme lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.967
ARA76038.1
Cytochrome c nitrite reductase pentaheme subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.946
ARA76040.1
Cytochrome c nitrite reductase subunit NrfD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.943
nrfA
Ammonia-forming cytochrome c nitrite reductase subunit c552; Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process; Belongs to the cytochrome c-552 family.
 
   
 0.857
ARA76048.1
Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.857
ARA76049.1
Thiol:disulfide interchange protein; Cytochrome c-type biogenesis thioredoxin; involved in the reduction of disulfide bonds to allow heme bonding; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.854
ARA76039.1
Cytochrome c nitrite reductase Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.822
ARA77593.1
Cytochrome c nitrite reductase subunit NrfD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.804
ARA76050.1
Cytochrome c-type biogenesis protein CcmH; Possible subunit of a heme lyase.
 
  
 0.769
Your Current Organism:
Pectobacterium brasiliense
NCBI taxonomy Id: 180957
Other names: CFBP 6617, Erwinia carotovora subsp. brasiliensis, LMG 21371, LMG:21371, NCPPB 4609, P. brasiliense, Pectobacterium brasiliense Portier et al. 2019, Pectobacterium brasiliensis, Pectobacterium carotovorum subsp. brasiliense, Pectobacterium carotovorum subsp. brasiliensis, strain 212
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