Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ARA76382.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family. (311 aa)    
Predicted Functional Partners:
ARA76383.1
Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.972
ARA76384.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.949
ARA76578.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.929
ARA75066.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.918
ARA76577.1
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.910
ARA76579.1
Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.890
ARA75065.1
Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.887
znuB
Zinc ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.730
ARA76381.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.726
znuC
Zinc import ATP-binding protein ZnuC; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.
  
  
 0.625
Your Current Organism:
Pectobacterium brasiliense
NCBI taxonomy Id: 180957
Other names: CFBP 6617, Erwinia carotovora subsp. brasiliensis, LMG 21371, LMG:21371, NCPPB 4609, P. brasiliense, Pectobacterium brasiliense Portier et al. 2019, Pectobacterium brasiliensis, Pectobacterium carotovorum subsp. brasiliense, Pectobacterium carotovorum subsp. brasiliensis, strain 212
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