Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARA76423.1OsmC family peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)    
Predicted Functional Partners:
dps
DNA starvation/stationary phase protection protein; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family.
 
  
 0.701
ARA77923.1
Molecular chaperone OsmY; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.665
ARA75763.1
Protein ElaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.623
ARA77852.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.613
ARA76953.1
Proteolipid membrane potential modulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.594
dkgA
2,5-didehydrogluconate reductase A; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.585
ARA76532.1
Serine protein kinase PrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.583
ARA77860.1
CsbD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.
  
  
 0.538
ARA76530.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.511
ARA77921.1
Stress-response protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.501
Your Current Organism:
Pectobacterium brasiliense
NCBI taxonomy Id: 180957
Other names: CFBP 6617, Erwinia carotovora subsp. brasiliensis, LMG 21371, LMG:21371, NCPPB 4609, P. brasiliense, Pectobacterium brasiliense Portier et al. 2019, Pectobacterium brasiliensis, Pectobacterium carotovorum subsp. brasiliense, Pectobacterium carotovorum subsp. brasiliensis, strain 212
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.