Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ARA76796.1Spermidine/putrescine ABC transporter substrate-binding protein PotF; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family. (369 aa)    
Predicted Functional Partners:
ARA76793.1
Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.998
ARA76794.1
Putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.986
potG
Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 0.985
potC
Spermidine/putrescine ABC transporter permease PotC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.982
ARA76286.1
Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.957
potB
Spermidine/putrescine ABC transporter permease PotB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.890
ARA76285.1
Polyamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.888
ARA74531.1
Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.780
potA
Spermidine/putrescine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.722
potA-2
Putrescine/spermidine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.
 
 
 0.699
Your Current Organism:
Pectobacterium brasiliense
NCBI taxonomy Id: 180957
Other names: CFBP 6617, Erwinia carotovora subsp. brasiliensis, LMG 21371, LMG:21371, NCPPB 4609, P. brasiliense, Pectobacterium brasiliense Portier et al. 2019, Pectobacterium brasiliensis, Pectobacterium carotovorum subsp. brasiliense, Pectobacterium carotovorum subsp. brasiliensis, strain 212
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