Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ARA77499.1Phosphonate ABC transporter, permease protein PhnE; Derived by automated computational analysis using gene prediction method: Protein Homology. (299 aa)    
Predicted Functional Partners:
ARA77501.1
Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.994
ARA77502.1
Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
ARA77500.1
Phosphonate ABC transporter, permease protein PhnE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.982
ARA77507.1
Carbon-phosphorus lyase complex subunit PhnI; Required for the use of phosphonate and phosphite; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.867
ARA77508.1
Carbon-phosphorus lyase subunit PhnH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.867
ARA77505.1
Phosphonate C-P lyase system protein PhnK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.845
ARA77506.1
Carbon-phosphorus lyase complex subunit PhnJ; Required for use of phosphonate and phosphite; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.827
ARA77504.1
Phosphonate C-P lyase system protein PhnL; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.822
ARA77509.1
Phosphonate C-P lyase system protein PhnG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.820
ARA77503.1
Phosphonate metabolism protein PhnM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.799
Your Current Organism:
Pectobacterium brasiliense
NCBI taxonomy Id: 180957
Other names: CFBP 6617, Erwinia carotovora subsp. brasiliensis, LMG 21371, LMG:21371, NCPPB 4609, P. brasiliense, Pectobacterium brasiliense Portier et al. 2019, Pectobacterium brasiliensis, Pectobacterium carotovorum subsp. brasiliense, Pectobacterium carotovorum subsp. brasiliensis, strain 212
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