rimI protein (Pectobacterium brasiliense) - STRING interaction network

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rimI

Ribosomal-protein-alanine N-acetyltransferase RimI; Acetylates the N-terminal alanine of ribosomal protein S18. (147 aa)

Predicted Functional Partners:

ARA77766.1

0.939

rsmC

0.563

smpB

0.548

guaA

0.488

ARA76556.1

0.484

ARA74873.1

0.474

prfC

0.456

ARA77768.1

0.442

ARA76685.1

0.439

ARA75765.1

0.421

Your Current Organism:

Pectobacterium brasiliense

NCBI taxonomy Id: 180957
Other names: CFBP 6617, Erwinia carotovora subsp. brasiliensis, LMG 21371, LMG:21371, NCPPB 4609, P. brasiliense, Pectobacterium brasiliense Portier et al. 2019, Pectobacterium brasiliensis, Pectobacterium carotovorum subsp. brasiliense, Pectobacterium carotovorum subsp. brasiliensis, strain 212

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARA74873.1	rimI	B5S52_02800	B5S52_18530	Noncanonical pyrimidine nucleotidase, YjjG family; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosomal-protein-alanine N-acetyltransferase RimI; Acetylates the N-terminal alanine of ribosomal protein S18.	0.474
ARA75765.1	ARA76685.1	B5S52_07725	B5S52_12655	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosomal protein S5 alanine N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
ARA75765.1	rimI	B5S52_07725	B5S52_18530	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosomal-protein-alanine N-acetyltransferase RimI; Acetylates the N-terminal alanine of ribosomal protein S18.	0.421
ARA76556.1	guaA	B5S52_11970	B5S52_06610	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	IMP dehydrogenase; Catalyzes the synthesis of GMP from XMP.	0.490
ARA76556.1	rimI	B5S52_11970	B5S52_18530	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosomal-protein-alanine N-acetyltransferase RimI; Acetylates the N-terminal alanine of ribosomal protein S18.	0.484
ARA76685.1	ARA75765.1	B5S52_12655	B5S52_07725	Ribosomal protein S5 alanine N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.408
ARA76685.1	rimI	B5S52_12655	B5S52_18530	Ribosomal protein S5 alanine N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosomal-protein-alanine N-acetyltransferase RimI; Acetylates the N-terminal alanine of ribosomal protein S18.	0.439
ARA77766.1	ARA77768.1	B5S52_18525	B5S52_18535	DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.442
ARA77766.1	rimI	B5S52_18525	B5S52_18530	DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.	Ribosomal-protein-alanine N-acetyltransferase RimI; Acetylates the N-terminal alanine of ribosomal protein S18.	0.939
ARA77766.1	rsmC	B5S52_18525	B5S52_18520	DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.	16S rRNA (guanine(1207)-N(2))-methyltransferase; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family.	0.635
ARA77768.1	ARA77766.1	B5S52_18535	B5S52_18525	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.	0.442
ARA77768.1	rimI	B5S52_18535	B5S52_18530	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Ribosomal-protein-alanine N-acetyltransferase RimI; Acetylates the N-terminal alanine of ribosomal protein S18.	0.442
guaA	ARA76556.1	B5S52_06610	B5S52_11970	IMP dehydrogenase; Catalyzes the synthesis of GMP from XMP.	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.490
guaA	prfC	B5S52_06610	B5S52_19385	IMP dehydrogenase; Catalyzes the synthesis of GMP from XMP.	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	0.606
guaA	rimI	B5S52_06610	B5S52_18530	IMP dehydrogenase; Catalyzes the synthesis of GMP from XMP.	Ribosomal-protein-alanine N-acetyltransferase RimI; Acetylates the N-terminal alanine of ribosomal protein S18.	0.488
prfC	guaA	B5S52_19385	B5S52_06610	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	IMP dehydrogenase; Catalyzes the synthesis of GMP from XMP.	0.606
prfC	rimI	B5S52_19385	B5S52_18530	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	Ribosomal-protein-alanine N-acetyltransferase RimI; Acetylates the N-terminal alanine of ribosomal protein S18.	0.456
prfC	smpB	B5S52_19385	B5S52_17945	Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.	SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]	0.523
rimI	ARA74873.1	B5S52_18530	B5S52_02800	Ribosomal-protein-alanine N-acetyltransferase RimI; Acetylates the N-terminal alanine of ribosomal protein S18.	Noncanonical pyrimidine nucleotidase, YjjG family; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.474
rimI	ARA75765.1	B5S52_18530	B5S52_07725	Ribosomal-protein-alanine N-acetyltransferase RimI; Acetylates the N-terminal alanine of ribosomal protein S18.	GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.421

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