Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ARA77851.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (134 aa)    
Predicted Functional Partners:
ARA77852.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.980
ARA77853.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.849
mzrA
Modulator protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.
       0.798
ARA77849.1
DedA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.790
ARA77854.1
Cell division protein FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.737
ARA77923.1
Molecular chaperone OsmY; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.682
ARA77340.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.669
ARA75763.1
Protein ElaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.654
ARA76532.1
Serine protein kinase PrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.635
ARA75196.1
NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.621
Your Current Organism:
Pectobacterium brasiliense
NCBI taxonomy Id: 180957
Other names: CFBP 6617, Erwinia carotovora subsp. brasiliensis, LMG 21371, LMG:21371, NCPPB 4609, P. brasiliense, Pectobacterium brasiliense Portier et al. 2019, Pectobacterium brasiliensis, Pectobacterium carotovorum subsp. brasiliense, Pectobacterium carotovorum subsp. brasiliensis, strain 212
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