Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ARA77860.1CsbD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. (69 aa)    
Predicted Functional Partners:
ARA77923.1
Molecular chaperone OsmY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.951
ARA77922.1
DUF1328 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.927
ARA78571.1
DUF903 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.819
ARA78080.1
Osmotically-inducible protein OsmY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.651
ARA77473.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.596
ARA76423.1
OsmC family peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.538
ARA77921.1
Stress-response protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.530
ARA76273.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.462
wecH
Acetyltransferase; Responsible for the incorporation of O-acetyl groups into the enterobacterial common antigen (ECA) trisaccharide repeat units.
   
    0.459
ARA77130.1
Polysaccharide export protein Wza; Required for the translocation of capsular polysaccharide through the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.439
Your Current Organism:
Pectobacterium brasiliense
NCBI taxonomy Id: 180957
Other names: CFBP 6617, Erwinia carotovora subsp. brasiliensis, LMG 21371, LMG:21371, NCPPB 4609, P. brasiliense, Pectobacterium brasiliense Portier et al. 2019, Pectobacterium brasiliensis, Pectobacterium carotovorum subsp. brasiliense, Pectobacterium carotovorum subsp. brasiliensis, strain 212
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