Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARA78021.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0306 family. (148 aa)    
Predicted Functional Partners:
ARA78022.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ARA76407.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.694
ARA76175.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.627
mukB
Chromosome partition protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily.
  
     0.614
ARA78355.1
Virulence protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
ARA77854.1
Cell division protein FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.569
ARA78020.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.539
ARA76836.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.530
ARA75850.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.522
ARA78023.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.521
Your Current Organism:
Pectobacterium brasiliense
NCBI taxonomy Id: 180957
Other names: CFBP 6617, Erwinia carotovora subsp. brasiliensis, LMG 21371, LMG:21371, NCPPB 4609, P. brasiliense, Pectobacterium brasiliense Portier et al. 2019, Pectobacterium brasiliensis, Pectobacterium carotovorum subsp. brasiliense, Pectobacterium carotovorum subsp. brasiliensis, strain 212
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