Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ARA78275.1acyl-CoA desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)    
Predicted Functional Partners:
ARA78276.1
acyl-CoA desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.981
ARA78277.1
Fatty acid hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.936
ARA74601.1
Phospholipase; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.
     
  0.900
ARA78278.1
Inositol phosphorylceramide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.898
ARA78279.1
CoF synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.882
ARA78280.1
MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.882
ARA78281.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.835
ARA78282.1
ketoacyl-ACP synthase III; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.814
ARA75318.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.599
ARA78274.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.598
Your Current Organism:
Pectobacterium brasiliense
NCBI taxonomy Id: 180957
Other names: CFBP 6617, Erwinia carotovora subsp. brasiliensis, LMG 21371, LMG:21371, NCPPB 4609, P. brasiliense, Pectobacterium brasiliense Portier et al. 2019, Pectobacterium brasiliensis, Pectobacterium carotovorum subsp. brasiliense, Pectobacterium carotovorum subsp. brasiliensis, strain 212
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