STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001627375_01187Unannotated protein. (137 aa)    
Predicted Functional Partners:
GCA_001627375_00503
Unannotated protein.
    
 0.921
GCA_001627375_00779
Unannotated protein.
  
 
 0.831
GCA_001627375_01735
Unannotated protein.
   
   0.761
GCA_001627375_01186
Unannotated protein.
       0.714
GCA_001627375_00128
Unannotated protein.
   
   0.696
GCA_001627375_01864
Unannotated protein.
  
 
 0.685
GCA_001627375_00912
Unannotated protein.
  
 
 0.656
GCA_001627375_01639
Unannotated protein.
  
 
 0.656
GCA_001627375_01188
Unannotated protein.
       0.645
GCA_001627375_01185
Unannotated protein.
       0.581
Your Current Organism:
Rhodobacteraceae bacterium REDSEAS02B3
NCBI taxonomy Id: 1811619
Other names: R. bacterium REDSEA-S02_B3, Rhodobacteraceae bacterium REDSEA-S02_B3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.