STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001627925_02454Unannotated protein. (278 aa)    
Predicted Functional Partners:
GCA_001627925_02453
Unannotated protein.
   
 0.867
GCA_001627925_02455
Unannotated protein.
       0.816
GCA_001627925_00775
Unannotated protein.
    
  0.780
GCA_001627925_00075
Unannotated protein.
  
 0.718
GCA_001627925_00162
Unannotated protein.
    
  0.678
GCA_001627925_01677
Unannotated protein.
  
 
  0.677
GCA_001627925_00925
Unannotated protein.
  
 
 0.670
GCA_001627925_00826
Unannotated protein.
  
 0.665
GCA_001627925_02452
Unannotated protein.
       0.626
GCA_001627925_01105
Unannotated protein.
  
 
 0.621
Your Current Organism:
Rhodobacteraceae bacterium REDSEAS34B6
NCBI taxonomy Id: 1811624
Other names: R. bacterium REDSEA-S34_B6, Rhodobacteraceae bacterium REDSEA-S34_B6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.