STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001629325_00163Unannotated protein. (367 aa)    
Predicted Functional Partners:
GCA_001629325_00297
Unannotated protein.
 
 0.999
GCA_001629325_00298
Unannotated protein.
 
 
 0.994
GCA_001629325_00299
Unannotated protein.
 
 
 0.989
GCA_001629325_00727
Unannotated protein.
     
 0.906
GCA_001629325_00164
Unannotated protein.
       0.757
GCA_001629325_00165
Unannotated protein.
       0.736
GCA_001629325_00166
Unannotated protein.
       0.550
GCA_001629325_00391
Unannotated protein.
    
  0.533
GCA_001629325_00392
Unannotated protein.
   
 
 0.525
Your Current Organism:
Gammaproteobacteria bacterium REDSEAS03B5
NCBI taxonomy Id: 1811661
Other names: G. bacterium REDSEA-S03_B5, Gammaproteobacteria bacterium REDSEA-S03_B5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.