STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001629325_00770Unannotated protein. (360 aa)    
Predicted Functional Partners:
GCA_001629325_00179
Unannotated protein.
 
  
 0.840
GCA_001629325_00769
Unannotated protein.
   
   0.708
GCA_001629325_00481
Unannotated protein.
    
 0.691
GCA_001629325_00555
Unannotated protein.
    
  0.656
GCA_001629325_00768
Unannotated protein.
       0.642
GCA_001629325_00037
Unannotated protein.
     
 0.640
GCA_001629325_00078
Unannotated protein.
    
 0.635
GCA_001629325_00002
Unannotated protein.
     
 0.632
GCA_001629325_00276
Unannotated protein.
     
 0.626
GCA_001629325_00742
Unannotated protein.
  
  
 0.626
Your Current Organism:
Gammaproteobacteria bacterium REDSEAS03B5
NCBI taxonomy Id: 1811661
Other names: G. bacterium REDSEA-S03_B5, Gammaproteobacteria bacterium REDSEA-S03_B5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.