STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB83522.1Uncharacterized membrane protein. (693 aa)    
Predicted Functional Partners:
SDB83547.1
LytR cell envelope-related transcriptional attenuator.
 
     0.696
SDB83535.1
Transcription regulator of the Arc/MetJ class.
       0.661
SDB83494.1
Hypothetical protein.
       0.566
SDB83508.1
Hypothetical protein.
       0.566
SDB83481.1
Hypothetical protein.
       0.488
SDC66379.1
Hypothetical protein.
  
     0.463
SDB86631.1
Phospholipase_D-nuclease N-terminal.
  
     0.450
SDD37834.1
Phospholipase_D-nuclease N-terminal.
  
     0.446
SDB85323.1
Uncharacterized membrane protein HdeD, DUF308 family.
  
     0.430
SDD07249.1
Hypothetical protein.
  
     0.419
Your Current Organism:
Sanguibacter gelidistatuariae
NCBI taxonomy Id: 1814289
Other names: ATCC TSD-17, DSM 100501, JCM 30887, S. gelidistatuariae, Sanguibacter gelidistatuariae Pikuta et al. 2017, Sanguibacter sp. ISLP-3, Sanguibacteraceae bacterium ISLP-3, strain ISLP-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.