STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
atp2a1ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1. (1032 aa)    
Predicted Functional Partners:
ENSSFAP00005056234
annotation not available
   
 0.897
ENSSFAP00005014521
annotation not available
    
 0.854
tmem165
Transmembrane protein 165.
   
 
 0.778
LOC115388505
Nuclear receptor ROR-alpha A-like.
     
  0.760
rora
RAR related orphan receptor A.
     
  0.760
LOC115397637
Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform-like.
   
 0.740
ENSSFAP00005017025
Protein phosphatase 3, catalytic subunit, alpha isozyme.
   
 0.740
LOC115396001
Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform-like.
   
 0.740
LOC115382478
Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform-like.
   
 0.740
LOC115383099
Serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform-like.
   
 0.740
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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