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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atp2a1ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1. (1032 aa)    
Predicted Functional Partners:
ENSSFAP00005056234
annotation not available
   
 0.863
ATP5F1A
ATP synthase F1 subunit alpha.
  
 
 0.753
LOC115398687
ATP synthase subunit alpha, mitochondrial-like.
  
 
 0.753
LOC115399237
V-type proton ATPase subunit B, brain isoform.
  
 0.688
ENSSFAP00005021138
annotation not available
   
0.669
atp7a
ATPase copper transporting alpha.
   
0.669
ENSSFAP00005010334
ATPase plasma membrane Ca2+ transporting 2.
  
 
0.660
ENSSFAP00005014034
ATPase plasma membrane Ca2+ transporting 2.
  
 
0.660
LOC115404398
Plasma membrane calcium-transporting ATPase 1.
  
 
0.660
ENSSFAP00005037502
ATPase plasma membrane Ca2+ transporting 3b.
  
 
0.660
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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