STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc42ep4CDC42 effector protein 4. (340 aa)    
Predicted Functional Partners:
LOC115388642
Cell division control protein 42 homolog.
    
 0.808
CDC42
Cell division control protein 42 homolog.
    
 0.808
rhoq
Ras homolog family member Q.
    
 0.774
ENSSFAP00005052590
Ras homolog family member H.
    
 0.774
LOC115396320
Septin-7.
    
 0.762
ENSSFAP00005012318
annotation not available
    
 0.762
LOC115391256
Septin-7-like.
    
 0.762
LOC115391256-2
Septin-7-like.
    
 0.762
LOC115397580
Septin-2.
    
 0.754
LOC115405119
septin-2B.
    
 0.754
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.