STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tyw5tRNA-yW synthesizing protein 5. (336 aa)    
Predicted Functional Partners:
lcmt2
Leucine carboxyl methyltransferase 2.
 
    
 0.876
ENSSFAP00005051317
tRNA methyltransferase 12 homolog.
 
    
 0.764
LOC115401029
Hypoxia-inducible factor 1-alpha-like.
    
 0.666
LOC115399568
Endothelial PAS domain-containing protein 1-like.
    
 0.666
ENSSFAP00005032794
annotation not available
    
 0.666
NPAS3
Neuronal PAS domain protein 3.
    
 0.666
ENSSFAP00005041031
annotation not available
    
 0.666
ENSSFAP00005042488
Neuronal PAS domain protein 1.
    
 0.666
ENSSFAP00005046266
annotation not available
    
 0.666
tyw1
tRNA-yW synthesizing protein 1 homolog.
      
 0.560
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.