STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005001847Potassium voltage-gated channel, shaker-related subfamily, beta member 1 b. (386 aa)    
Predicted Functional Partners:
nup133
Nucleoporin 133.
   
 0.834
nup107
Nucleoporin 107.
   
 0.831
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.807
ENSSFAP00005024223
SEH1-like (S. cerevisiae).
    
 0.791
nup85
Nucleoporin 85.
    
 0.789
ENSSFAP00005007841
Potassium voltage-gated channel modifier subfamily V member 1.
    
 0.738
kcng1
Potassium voltage-gated channel modifier subfamily G member 1.
    
 0.724
ENSSFAP00005003672
Si:dkey-43k4.5.
    
 0.722
LOC115391750
Aldo-keto reductase family 1 member B1-like.
  
 0.716
hoga1
4-hydroxy-2-oxoglutarate aldolase 1.
  
 0.716
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.