STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115391566Retinaldehyde-binding protein 1-like. (307 aa)    
Predicted Functional Partners:
ENSSFAP00005002741
Ankyrin repeat and FYVE domain containing 1.
    
 0.579
dnajc10
DnaJ heat shock protein family (Hsp40) member C10.
   
 0.555
ENSSFAP00005047457
Retinol dehydrogenase 5 (11-cis/9-cis).
   
 0.554
dhrs9
Dehydrogenase/reductase 9.
   
 0.548
LOC115384206
Retinol dehydrogenase 7-like.
   
 0.531
sdr16c5
Short chain dehydrogenase/reductase family 16C member 5.
   
  0.524
LOC115387925
Retinol dehydrogenase 10-A-like.
   
  0.524
ENSSFAP00005043992
annotation not available
   
  0.524
LOC115388753
Short-chain dehydrogenase/reductase 3-like.
   
  0.524
rdh10
Retinol dehydrogenase 10.
   
  0.524
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.