STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rundc1RUN domain containing 1. (619 aa)    
Predicted Functional Partners:
vps51
VPS51 subunit of GARP complex.
   
  
 0.587
LOC115393112
Putative protein PTGES3L.
      
 0.583
ica1l
Islet cell autoantigen 1 like.
    
 
 0.562
ccdc186
Coiled-coil domain containing 186.
      
 0.550
ENSSFAP00005053559
VPS53 subunit of GARP complex.
      
 0.535
vps54
VPS54 subunit of GARP complex.
      
 0.461
tmf1
TATA element modulatory factor 1.
      
 0.461
eipr1
EARP complex and GARP complex interacting protein 1.
      
 0.457
vps52
VPS52 subunit of GARP complex.
      
 0.452
rab2a
RAB2A, member RAS oncogene family.
    
 
 0.435
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.