STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chtf8Chromosome transmission fidelity factor 8. (135 aa)    
Predicted Functional Partners:
dscc1
DNA replication and sister chromatid cohesion 1.
   
 0.999
ENSSFAP00005022262
annotation not available
   
 0.999
rfc4
Replication factor C subunit 4.
   
 0.993
rfc3
Replication factor C subunit 3.
   
 0.983
rfc2
Replication factor C subunit 2.
   
 0.982
ercc2
ERCC excision repair 2, TFIIH core complex helicase subunit.
   
 0.979
RFC5
Replication factor C subunit 5-like.
   
 0.953
ENSSFAP00005038879
Replication factor C (activator 1) 5.
   
 0.953
ENSSFAP00005038884
annotation not available
   
 0.953
ENSSFAP00005016173
RAD17 checkpoint clamp loader component.
   
 0.905
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.