STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005003410Serine and arginine rich splicing factor 5b. (152 aa)    
Predicted Functional Partners:
ENSSFAP00005014360
annotation not available
   
 0.912
nxf1
Nuclear RNA export factor 1.
   
 0.911
cdc5l
Cell division cycle 5 like.
   
 0.903
ncbp2
Nuclear cap binding protein subunit 2.
    
 0.897
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.885
ENSSFAP00005004093
annotation not available
  
 0.883
u2af2
U2 small nuclear RNA auxiliary factor 2.
   
 0.881
cstf3
Cleavage stimulation factor subunit 3.
  
 0.880
fip1l1
Factor interacting with PAPOLA and CPSF1.
   
 0.863
LOC115402644
Transformer-2 protein homolog beta-like.
  
 0.863
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.