STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005003831Family with sequence similarity 83 member E. (361 aa)    
Predicted Functional Partners:
ENSSFAP00005021425
annotation not available
    
  0.865
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.840
ENSSFAP00005018647
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.759
rims2
Regulating synaptic membrane exocytosis 2.
    
  0.688
ENSSFAP00005031220
annotation not available
    
  0.688
rbbp5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.676
ash2l
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.674
LOC115403792
ranBP2-like and GRIP domain-containing protein 3.
    
 0.670
ripk4
Receptor interacting serine/threonine kinase 4.
   
  0.658
ENSSFAP00005003301
annotation not available
    
  0.635
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.