STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005004013Zinc finger protein 827. (1110 aa)    
Predicted Functional Partners:
ENSSFAP00005021425
annotation not available
    
  0.861
LOC115391732
Histone-binding protein RBBP7.
    
 0.778
RBBP4
Histone-binding protein RBBP4-like.
    
 0.778
LOC115407246
Histone-binding protein RBBP4.
    
 0.778
ENSSFAP00005020106
annotation not available
    
  0.635
ENSSFAP00005021420
annotation not available
    
  0.614
dclre1b
DNA cross-link repair 1B.
    
 
 0.586
YTHDC2
YTH domain containing 2.
    
  0.584
rnf166
Ring finger protein 166.
    
 
 0.583
ENSSFAP00005029166
Mitochondrial ribosomal protein S6.
    
 0.575
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.