STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
anapc11Anaphase promoting complex subunit 11. (84 aa)    
Predicted Functional Partners:
ENSSFAP00005047097
UBX domain protein 7.
    
 0.993
skp1
S-phase kinase associated protein 1.
   
 0.983
cul5
Cullin 5.
    
 0.982
cul2
Cullin 2.
    
 0.982
eloc
Elongin C.
   
 0.965
ddb1
Damage specific DNA binding protein 1.
    
 0.960
anapc2
Anaphase promoting complex subunit 2.
    
 0.957
ENSSFAP00005041163
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
    
 0.955
LOC115397780
F-box/WD repeat-containing protein 11.
    
 0.954
vhl
Von Hippel-Lindau tumor suppressor.
    
 0.951
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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