STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005004148annotation not available (142 aa)    
Predicted Functional Partners:
LOC115403792
ranBP2-like and GRIP domain-containing protein 3.
   
 0.987
mad1l1
Mitotic arrest deficient 1 like 1.
   
 0.926
nup107
Nucleoporin 107.
    
 0.920
nxf1
Nuclear RNA export factor 1.
   
 0.918
nup153
Nucleoporin 153.
   
 0.905
ENSSFAP00005047731
annotation not available
   
 0.905
mad2l1
Mitotic arrest deficient 2 like 1.
    
 0.880
nup85
Nucleoporin 85.
    
 0.873
nup93
Nucleoporin 93.
   
 0.865
sec13
SEC13 homolog, nuclear pore and COPII coat complex component.
    
 0.863
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.