STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIM2-2Lens intrinsic membrane protein 2. (147 aa)    
Predicted Functional Partners:
ENSSFAP00005000099
Danio rerio leucine-rich repeat containing G protein-coupled receptor 4 (lgr4), mRNA.
    
  0.591
ENSSFAP00005001015
Relaxin family peptide receptor 2a.
    
  0.591
ENSSFAP00005009520
annotation not available
    
  0.591
ENSSFAP00005034990
Relaxin family peptide receptor 1.
    
  0.591
ENSSFAP00005051415
annotation not available
   
  0.541
LOC115398994
Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1.
    
  0.516
lrit3
Leucine rich repeat, Ig-like and transmembrane domains 3.
    
  0.516
lrit1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
  0.516
HGFAC
HGF activator.
    
  0.507
sh3rf3
SH3 domain containing ring finger 3.
    
  0.507
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.