STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005004704Dihydrouridine synthase 1-like (S. cerevisiae). (412 aa)    
Predicted Functional Partners:
ENSSFAP00005018841
Proteasome 20S subunit beta 1.
   
 
  0.913
trmt11
tRNA methyltransferase 11 homolog.
  
  
 0.887
eprs1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.839
utp3
UTP3 small subunit processome component.
   
    0.800
bysl
Bystin like.
   
    0.790
rpf1
Ribosome production factor 1 homolog.
   
    0.788
imp4
IMP U3 small nucleolar ribonucleoprotein 4.
   
    0.786
pus1
Pseudouridine synthase 1.
   
    0.786
ENSSFAP00005046617
Ribosome biogenesis regulator 1 homolog.
   
    0.784
ENSSFAP00005031243
Ddb1 and cul4 associated factor 13.
   
    0.783
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.