STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115393442Major facilitator superfamily domain-containing protein 1-like. (484 aa)    
Predicted Functional Partners:
ENSSFAP00005009674
annotation not available
  
 0.872
LOC115397148
Cytochrome b5 reductase 4.
    
  0.828
ephx2
Epoxide hydrolase 2.
    
 0.613
gapdh
Glyceraldehyde-3-phosphate dehydrogenase.
   
 0.610
LOC115396327
Glyceraldehyde-3-phosphate dehydrogenase 2.
   
 0.610
ENSSFAP00005023067
annotation not available
   
 0.610
LOC115409554
Glyceraldehyde-3-phosphate dehydrogenase-like.
   
 0.610
cstf3
Cleavage stimulation factor subunit 3.
    
 0.585
tk1
Thymidine kinase 1.
     
 0.580
LOC115394313
Thymidylate synthase-like.
    
  0.565
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.