STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc35f4Solute carrier family 35 member F4. (467 aa)    
Predicted Functional Partners:
tmem268
Transmembrane protein 268.
      
 0.538
dhx40
DEAH-box helicase 40.
      
 0.463
tspan18
Tetraspanin 18.
      
 0.457
zc3h15
Zinc finger CCCH-type containing 15.
      
 0.435
ankrd40
Ankyrin repeat domain 40.
      
 0.431
atp5pb
ATP synthase peripheral stalk-membrane subunit b.
      
 0.403
ENSSFAP00005041789
Transmembrane protein 266.
      
 0.402
ENSSFAP00005056194
annotation not available
      
 0.402
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.