STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtg1Mitochondrial ribosome associated GTPase 1. (328 aa)    
Predicted Functional Partners:
gtpbp4
GTP binding protein 4.
   
 0.983
malsu1
Mitochondrial assembly of ribosomal large subunit 1.
  
 
 0.983
mrpl47
Mitochondrial ribosomal protein L47.
    
 
 0.977
gtpbp8
GTP binding protein 8 (putative).
  
 
 0.975
mrm3
Mitochondrial rRNA methyltransferase 3.
  
 
 0.965
mrpl11
Mitochondrial ribosomal protein L11.
   
 
 0.963
mrpl3
Mitochondrial ribosomal protein L3.
   
 
 0.963
ENSSFAP00005037364
BOP1 ribosomal biogenesis factor.
   
 0.961
nsa2
NSA2 ribosome biogenesis factor.
   
 0.960
ENSSFAP00005013807
annotation not available
   
 
 0.958
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.