STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmed6Transmembrane p24 trafficking protein 6. (240 aa)    
Predicted Functional Partners:
tmed10
Transmembrane p24 trafficking protein 10.
   
 
 0.640
tmed2
Transmembrane p24 trafficking protein 2.
   
 
 0.636
nip7
Nucleolar pre-rRNA processing protein NIP7.
   
  
 0.493
tmed9
Transmembrane p24 trafficking protein 9.
   
 
 0.470
LOC115407590
Transmembrane emp24 domain-containing protein 4-like.
   
 
 0.470
ostm1
Osteoclastogenesis associated transmembrane protein 1.
   
  
 0.466
cep76
Centrosomal protein 76.
      
 0.463
ENSSFAP00005016461
Ubiquitin-fold modifier 1.
      
 0.457
ENSSFAP00005023225
TraB domain containing.
      
 0.457
wdyhv1
WDYHV motif containing 1.
      
 0.430
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.