STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115401918KATNB1-like protein 1. (305 aa)    
Predicted Functional Partners:
ENSSFAP00005001969
Katanin p80 (WD repeat containing) subunit B 1.
    
 0.959
ENSSFAP00005047254
Katanin p60 subunit A-like 2.
   
 0.903
ENSSFAP00005001465
Katanin p60 (ATPase containing) subunit A 1.
   
 0.897
LOC115403069
Katanin p60 ATPase-containing subunit A-like 1.
   
 0.897
psmc2
Proteasome 26S subunit, ATPase 2.
    
 0.557
ENSSFAP00005007270
annotation not available
    
 0.557
shpk
Sedoheptulokinase.
    
 0.557
ENSSFAP00005025022
FGGY carbohydrate kinase domain containing.
    
 0.557
ENSSFAP00005025024
FGGY carbohydrate kinase domain containing.
    
 0.557
ENSSFAP00005031587
ATPase family AAA domain containing 2B.
    
 0.557
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.