STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005005934Integrin, beta 6. (765 aa)    
Predicted Functional Partners:
LOC115400167
Transforming growth factor beta-1 proprotein-like.
   
 0.976
itga4
Integrin subunit alpha 4.
   
 0.962
itga9
Integrin subunit alpha 9.
   
 0.962
itga1
Integrin subunit alpha 1.
   
 0.958
ENSSFAP00005029466
annotation not available
   
 0.957
ENSSFAP00005050653
Integrin, alpha 8.
   
 0.957
ITGA7
Integrin subunit alpha 7.
   
 0.956
ENSSFAP00005011471
Integrin, alpha 10.
   
 0.955
itga2
Integrin subunit alpha 2.
   
 0.955
LOC115389613
Integrin alpha-M-like.
   
 0.954
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.