STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSFAP00005006337Calpain 3a, (p94). (729 aa)    
Predicted Functional Partners:
LOC115395912
Calpain small subunit 1-like.
   
0.723
ENSSFAP00005023926
annotation not available
   
0.723
ENSSFAP00005026489
annotation not available
   
 0.711
ENSSFAP00005026491
annotation not available
   
 0.711
ENSSFAP00005026492
annotation not available
   
 0.711
ENSSFAP00005013529
Intersectin 2b.
   
 
  0.618
ENSSFAP00005029100
Intersectin 2a.
   
 
  0.618
ENSSFAP00005009315
Talin 1.
    
 0.582
tlnrd1
Talin rod domain containing 1.
    
 0.582
ENSSFAP00005019726
Talin rod domain containing 1.
    
 0.582
Your Current Organism:
Salarias fasciatus
NCBI taxonomy Id: 181472
Other names: S. fasciatus, jewelled blenny
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.